dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001451_1|CGC41
Gene ID: MGYG000001451_02642
Location and strand information: 2796078 - 2796791 (+)
Family: CE12
Protein type: CAZyme
Protein description: Rhamnogalacturonan acetylesterase RhgT
Protein isoelectric point: 5.3786
Protein molecular weight: 26234.5
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001451_1|CGC41
Gene ID: MGYG000001451_02643
Location and strand information: 2796793 - 2797656 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001451_1|CGC41
Gene ID: MGYG000001451_02644
Location and strand information: 2799622 - 2800686 (-)
Family: null
Protein type: null
Protein description: putative oxidoreductase YdgJ

Gene clsuter ID: MGYG000001451_1|CGC41
Gene ID: MGYG000001451_02645
Location and strand information: 2801149 - 2802831 (-)
Family: GH0
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.6658
Protein molecular weight: 63364.68
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001451_1|CGC41
Gene ID: MGYG000001451_02646
Location and strand information: 2802925 - 2804430 (-)
Family: GH43|GH43_10
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.5265
Protein molecular weight: 55727.06
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001451_1|CGC41
Gene ID: MGYG000001451_02647
Location and strand information: 2804466 - 2805347 (-)
Family: 3.A.1.1.9
Protein type: TC
Protein description: Inner membrane ABC transporter permease protein YcjP

Gene clsuter ID: MGYG000001451_1|CGC41
Gene ID: MGYG000001451_02648
Location and strand information: 2805360 - 2806259 (-)
Family: 3.A.1.1.9
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000001451_1|CGC41
Gene ID: MGYG000001451_02649
Location and strand information: 2806362 - 2808020 (-)
Family: 3.A.1.1.9
Protein type: TC
Protein description: Lipoprotein LipO

Gene clsuter ID: MGYG000001451_1|CGC41
Gene ID: MGYG000001451_02650
Location and strand information: 2808128 - 2809792 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Chemotaxis response regulator protein-glutamate methylesterase

Gene clsuter ID: MGYG000001451_1|CGC41
Gene ID: MGYG000001451_02651
Location and strand information: 2809794 - 2811527 (-)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001451_1|CGC41
Gene ID: MGYG000001451_02652
Location and strand information: 2811859 - 2812812 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000001451_1|CGC41
Gene ID: MGYG000001451_02653
Location and strand information: 2812915 - 2813166 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001451_1|CGC41
Gene ID: MGYG000001451_02654
Location and strand information: 2813233 - 2814729 (-)
Family: GH51
Protein type: CAZyme
Protein description: Intracellular exo-alpha-L-arabinofuranosidase 2
Protein isoelectric point: 5.9374
Protein molecular weight: 56178.34
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001451_1|CGC41
Gene ID: MGYG000001451_02655
Location and strand information: 2815096 - 2816046 (+)
Family: HTH_5
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001451_1|CGC41
Gene ID: MGYG000001451_02656
Location and strand information: 2816021 - 2816116 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001451_1|CGC41
Gene ID: MGYG000001451_02657
Location and strand information: 2816854 - 2822724 (-)
Family: CBM20|CBM34|CBM48|GH13|GH13_39
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.2927
Protein molecular weight: 212856.34
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001451_1|CGC41
Gene ID: MGYG000001451_02658
Location and strand information: 2823133 - 2824029 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000001451_1|CGC41
Gene ID: MGYG000001451_02659
Location and strand information: 2824135 - 2826777 (+)
Family: GH78|CBM67
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.7411
Protein molecular weight: 100148.97
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001451_1|CGC41
Gene ID: MGYG000001451_02660
Location and strand information: 2826849 - 2827529 (-)
Family: 3.A.1.122.4
Protein type: TC
Protein description: Putative hemin import ATP-binding protein HrtA

Gene clsuter ID: MGYG000001451_1|CGC41
Gene ID: MGYG000001451_02661
Location and strand information: 2827526 - 2828653 (-)
Family: 3.A.1.122.11
Protein type: TC
Protein description: putative ABC transporter permease

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001451_02642	Rhamnogalacturonan acetylesterase RhgT	CAZyme	2796078	2796791	+	CE12
MGYG000001451_02643	hypothetical protein	null	2796793	2797656	+	AP_endonuc_2
MGYG000001451_02644	putative oxidoreductase YdgJ	null	2799622	2800686	-	GFO_IDH_MocA\| GFO_IDH_MocA_C
MGYG000001451_02645	hypothetical protein	CAZyme	2801149	2802831	-	GH0
MGYG000001451_02646	hypothetical protein	CAZyme	2802925	2804430	-	GH43\| GH43_10
MGYG000001451_02647	Inner membrane ABC transporter permease protein YcjP	TC	2804466	2805347	-	3.A.1.1.9
MGYG000001451_02648	putative multiple-sugar transport system permease YteP	TC	2805360	2806259	-	3.A.1.1.9
MGYG000001451_02649	Lipoprotein LipO	TC	2806362	2808020	-	3.A.1.1.9
MGYG000001451_02650	Chemotaxis response regulator protein-glutamate methylesterase	TF	2808128	2809792	-	HTH_AraC+HTH_AraC
MGYG000001451_02651	hypothetical protein	TC	2809794	2811527	-	8.A.59.2.1
MGYG000001451_02652	HTH-type transcriptional activator RhaR	TF	2811859	2812812	+	HTH_AraC+HTH_AraC
MGYG000001451_02653	hypothetical protein	null	2812915	2813166	-	DUF6171
MGYG000001451_02654	Intracellular exo-alpha-L-arabinofuranosidase 2	CAZyme	2813233	2814729	-	GH51
MGYG000001451_02655	hypothetical protein	TF	2815096	2816046	+	HTH_5
MGYG000001451_02656	hypothetical protein	null	2816021	2816116	+	No domain
MGYG000001451_02657	hypothetical protein	CAZyme	2816854	2822724	-	CBM20\| CBM34\| CBM48\| GH13\| GH13_39
MGYG000001451_02658	HTH-type transcriptional activator RhaR	TF	2823133	2824029	-	HTH_AraC+HTH_AraC
MGYG000001451_02659	hypothetical protein	CAZyme	2824135	2826777	+	GH78\| CBM67
MGYG000001451_02660	Putative hemin import ATP-binding protein HrtA	TC	2826849	2827529	-	3.A.1.122.4
MGYG000001451_02661	putative ABC transporter permease	TC	2827526	2828653	-	3.A.1.122.11
Protein ID	Protein Name	Type	Start	End	Strand	Signature